diff --git a/api/pyproject.toml b/api/pyproject.toml
index 84b95fb226..0c8492dd31 100644
--- a/api/pyproject.toml
+++ b/api/pyproject.toml
@@ -5,89 +5,89 @@ requires-python = ">=3.11,<3.13"
 
 dependencies = [
     "aliyun-log-python-sdk~=0.9.37",
-    "arize-phoenix-otel~=0.9.2",
-    "azure-identity==1.16.1",
-    "beautifulsoup4==4.12.2",
-    "boto3==1.35.99",
+    "arize-phoenix-otel~=0.15.0",
+    "azure-identity==1.25.2",
+    "beautifulsoup4==4.14.3",
+    "boto3==1.42.59",
     "bs4~=0.0.1",
-    "cachetools~=5.3.0",
-    "celery~=5.5.2",
+    "cachetools~=7.0.2",
+    "celery~=5.6.2",
     "charset-normalizer>=3.4.4",
     "flask~=3.1.2",
-    "flask-compress>=1.17,<1.18",
+    "flask-compress>=1.17,<1.24",
     "flask-cors~=6.0.0",
     "flask-login~=0.6.3",
-    "flask-migrate~=4.0.7",
+    "flask-migrate~=4.1.0",
     "flask-orjson~=2.0.0",
     "flask-sqlalchemy~=3.1.1",
     "gevent~=25.9.1",
     "gmpy2~=2.3.0",
     "google-api-core>=2.19.1",
-    "google-api-python-client==2.189.0",
+    "google-api-python-client==2.191.0",
     "google-auth>=2.47.0",
-    "google-auth-httplib2==0.2.0",
+    "google-auth-httplib2==0.3.0",
     "google-cloud-aiplatform>=1.123.0",
     "googleapis-common-protos>=1.65.0",
-    "gunicorn~=23.0.0",
+    "gunicorn~=25.1.0",
     "httpx[socks]~=0.28.0",
     "jieba==0.42.1",
     "json-repair>=0.55.1",
     "jsonschema>=4.25.1",
-    "langfuse~=2.51.3",
-    "langsmith~=0.1.77",
-    "markdown~=3.5.1",
+    "langfuse~=3.14.5",
+    "langsmith~=0.7.10",
+    "markdown~=3.10.2",
     "mlflow-skinny>=3.0.0",
-    "numpy~=1.26.4",
+    "numpy~=2.4.2",
     "openpyxl~=3.1.5",
-    "opik~=1.8.72",
-    "litellm==1.77.1",                                  # Pinned to avoid madoka dependency issue
-    "opentelemetry-api==1.28.0",
-    "opentelemetry-distro==0.49b0",
-    "opentelemetry-exporter-otlp==1.28.0",
-    "opentelemetry-exporter-otlp-proto-common==1.28.0",
-    "opentelemetry-exporter-otlp-proto-grpc==1.28.0",
-    "opentelemetry-exporter-otlp-proto-http==1.28.0",
-    "opentelemetry-instrumentation==0.49b0",
-    "opentelemetry-instrumentation-celery==0.49b0",
-    "opentelemetry-instrumentation-flask==0.49b0",
-    "opentelemetry-instrumentation-httpx==0.49b0",
-    "opentelemetry-instrumentation-redis==0.49b0",
-    "opentelemetry-instrumentation-sqlalchemy==0.49b0",
-    "opentelemetry-propagator-b3==1.28.0",
-    "opentelemetry-proto==1.28.0",
-    "opentelemetry-sdk==1.28.0",
-    "opentelemetry-semantic-conventions==0.49b0",
-    "opentelemetry-util-http==0.49b0",
-    "pandas[excel,output-formatting,performance]~=2.2.2",
+    "opik~=1.10.25",
+    "litellm==1.82.0",                                  # Pinned to avoid madoka dependency issue
+    "opentelemetry-api==1.39.1",
+    "opentelemetry-distro==0.60b1",
+    "opentelemetry-exporter-otlp==1.39.1",
+    "opentelemetry-exporter-otlp-proto-common==1.39.1",
+    "opentelemetry-exporter-otlp-proto-grpc==1.39.1",
+    "opentelemetry-exporter-otlp-proto-http==1.39.1",
+    "opentelemetry-instrumentation==0.60b1",
+    "opentelemetry-instrumentation-celery==0.60b1",
+    "opentelemetry-instrumentation-flask==0.60b1",
+    "opentelemetry-instrumentation-httpx==0.60b1",
+    "opentelemetry-instrumentation-redis==0.60b1",
+    "opentelemetry-instrumentation-sqlalchemy==0.60b1",
+    "opentelemetry-propagator-b3==1.39.1",
+    "opentelemetry-proto==1.39.1",
+    "opentelemetry-sdk==1.39.1",
+    "opentelemetry-semantic-conventions==0.60b1",
+    "opentelemetry-util-http==0.60b1",
+    "pandas[excel,output-formatting,performance]~=3.0.1",
     "psycogreen~=1.0.2",
     "psycopg2-binary~=2.9.6",
     "pycryptodome==3.23.0",
     "pydantic~=2.12.5",
-    "pydantic-extra-types~=2.10.3",
-    "pydantic-settings~=2.12.0",
+    "pydantic-extra-types~=2.11.0",
+    "pydantic-settings~=2.13.1",
     "pyjwt~=2.11.0",
-    "pypdfium2==5.2.0",
+    "pypdfium2==5.5.0",
     "python-docx~=1.2.0",
-    "python-dotenv==1.0.1",
+    "python-dotenv==1.2.2",
     "pyyaml~=6.0.1",
     "readabilipy~=0.3.0",
     "redis[hiredis]~=7.2.0",
-    "resend~=2.9.0",
-    "sentry-sdk[flask]~=2.28.0",
+    "resend~=2.23.0",
+    "sentry-sdk[flask]~=2.54.0",
     "sqlalchemy~=2.0.29",
-    "starlette==0.49.1",
-    "tiktoken~=0.9.0",
-    "transformers~=4.56.1",
-    "unstructured[docx,epub,md,ppt,pptx]~=0.18.18",
-    "yarl~=1.18.3",
+    "starlette==0.52.1",
+    "tiktoken~=0.12.0",
+    "transformers~=5.2.0",
+    "unstructured[docx,epub,md,ppt,pptx]~=0.21.5",
+    "yarl~=1.23.0",
     "webvtt-py~=0.5.1",
-    "sseclient-py~=1.8.0",
+    "sseclient-py~=1.9.0",
     "httpx-sse~=0.4.0",
     "sendgrid~=6.12.3",
     "flask-restx~=1.3.2",
-    "packaging~=23.2",
+    "packaging~=26.0",
     "croniter>=6.0.0",
-    "weaviate-client==4.17.0",
+    "weaviate-client==4.20.1",
     "apscheduler>=3.11.0",
     "weave>=0.52.16",
     "fastopenapi[flask]>=0.7.0",
@@ -109,46 +109,46 @@ package = false
 # Required for development and running tests
 ############################################################
 dev = [
-    "coverage~=7.2.4",
-    "dotenv-linter~=0.5.0",
-    "faker~=38.2.0",
+    "coverage~=7.13.4",
+    "dotenv-linter~=0.7.0",
+    "faker~=40.5.1",
     "lxml-stubs~=0.5.1",
-    "basedpyright~=1.31.0",
-    "ruff~=0.14.0",
-    "pytest~=8.3.2",
-    "pytest-benchmark~=4.0.0",
-    "pytest-cov~=4.1.0",
-    "pytest-env~=1.1.3",
-    "pytest-mock~=3.14.0",
-    "testcontainers~=4.13.2",
+    "basedpyright~=1.38.2",
+    "ruff~=0.15.4",
+    "pytest~=9.0.2",
+    "pytest-benchmark~=5.2.3",
+    "pytest-cov~=7.0.0",
+    "pytest-env~=1.5.0",
+    "pytest-mock~=3.15.1",
+    "testcontainers~=4.14.1",
     "types-aiofiles~=25.1.0",
     "types-beautifulsoup4~=4.12.0",
-    "types-cachetools~=5.5.0",
+    "types-cachetools~=6.2.0",
     "types-colorama~=0.4.15",
     "types-defusedxml~=0.7.0",
-    "types-deprecated~=1.2.15",
-    "types-docutils~=0.21.0",
-    "types-jsonschema~=4.23.0",
-    "types-flask-cors~=5.0.0",
+    "types-deprecated~=1.3.1",
+    "types-docutils~=0.22.3",
+    "types-jsonschema~=4.26.0",
+    "types-flask-cors~=6.0.0",
     "types-flask-migrate~=4.1.0",
     "types-gevent~=25.9.0",
     "types-greenlet~=3.3.0",
     "types-html5lib~=1.1.11",
     "types-markdown~=3.10.2",
-    "types-oauthlib~=3.2.0",
+    "types-oauthlib~=3.3.0",
     "types-objgraph~=3.6.0",
     "types-olefile~=0.47.0",
     "types-openpyxl~=3.1.5",
     "types-pexpect~=4.9.0",
-    "types-protobuf~=5.29.1",
+    "types-protobuf~=6.32.1",
     "types-psutil~=7.2.2",
     "types-psycopg2~=2.9.21",
     "types-pygments~=2.19.0",
     "types-pymysql~=1.1.0",
     "types-python-dateutil~=2.9.0",
-    "types-pywin32~=310.0.0",
+    "types-pywin32~=311.0.0",
     "types-pyyaml~=6.0.12",
-    "types-regex~=2024.11.6",
+    "types-regex~=2026.2.28",
     "types-shapely~=2.1.0",
     "types-simplejson>=3.20.0",
     "types-six>=1.17.0",
@@ -161,13 +161,13 @@ dev = [
     "types_pyOpenSSL>=24.1.0",
     "types_cffi>=1.17.0",
     "types_setuptools>=80.9.0",
-    "pandas-stubs~=2.2.3",
+    "pandas-stubs~=3.0.0",
     "scipy-stubs>=1.15.3.0",
     "types-python-http-client>=3.3.7.20240910",
     "import-linter>=2.3",
     "types-redis>=4.6.0.20241004",
     "celery-types>=0.23.0",
-    "mypy~=1.17.1",
+    "mypy~=1.19.1",
     # "locust>=2.40.4",  # Temporarily removed due to compatibility issues. Uncomment when resolved.
     "sseclient-py>=1.8.0",
     "pytest-timeout>=2.4.0",
@@ -180,14 +180,14 @@ dev = [
 # Required for storage clients
 ############################################################
 storage = [
-    "azure-storage-blob==12.26.0",
+    "azure-storage-blob==12.28.0",
     "bce-python-sdk~=0.9.23",
-    "cos-python-sdk-v5==1.9.38",
+    "cos-python-sdk-v5==1.9.41",
     "esdk-obs-python==3.25.8",
     "google-cloud-storage>=3.0.0",
     "opendal~=0.46.0",
-    "oss2==2.18.5",
-    "supabase~=2.18.1",
+    "oss2==2.19.1",
+    "supabase~=2.28.0",
     "tos~=2.9.0",
 ]
 
@@ -201,29 +201,29 @@ tools = ["cloudscraper~=1.2.71", "nltk~=3.9.1"]
 # Required by vector store clients
 ############################################################
 vdb = [
-    "alibabacloud_gpdb20160503~=3.8.0",
-    "alibabacloud_tea_openapi~=0.3.9",
-    "chromadb==0.5.20",
-    "clickhouse-connect~=0.10.0",
+    "alibabacloud_gpdb20160503~=5.0.2",
+    "alibabacloud_tea_openapi~=0.4.3",
+    "chromadb==1.5.2",
+    "clickhouse-connect~=0.13.0",
     "clickzetta-connector-python>=0.8.102",
-    "couchbase~=4.3.0",
-    "elasticsearch==8.14.0",
+    "couchbase~=4.5.0",
+    "elasticsearch==9.3.0",
     "opensearch-py==3.1.0",
-    "oracledb==3.3.0",
+    "oracledb==3.4.2",
     "pgvecto-rs[sqlalchemy]~=0.2.1",
-    "pgvector==0.2.5",
-    "pymilvus~=2.5.0",
-    "pymochow==2.2.9",
+    "pgvector==0.4.2",
+    "pymilvus~=2.6.9",
+    "pymochow==2.3.6",
     "pyobvector~=0.2.17",
-    "qdrant-client==1.9.0",
+    "qdrant-client==1.17.0",
     "intersystems-irispython>=5.1.0",
-    "tablestore==6.3.7",
-    "tcvectordb~=1.6.4",
-    "tidb-vector==0.0.9",
-    "upstash-vector==0.6.0",
+    "tablestore==6.4.1",
+    "tcvectordb~=2.0.0",
+    "tidb-vector==0.0.15",
+    "upstash-vector==0.8.0",
     "volcengine-compat~=1.0.0",
-    "weaviate-client==4.17.0",
-    "xinference-client~=1.2.2",
+    "weaviate-client==4.20.1",
+    "xinference-client~=2.2.0",
     "mo-vector~=0.1.13",
     "mysql-connector-python>=9.3.0",
 ]